Teaching

Interactive material for courses at Chalmers.

Course

KMB042 Cellular metabolism and applied microbiology

Reversible Reaction Box R ⇌ P over an energy barrier. Set the energy levels and temperature, and see Q approach K. Includes a pathway mode where the reaction is kept away from equilibrium.

Course

KKR063 Metabolic engineering

TRY Explorer Titer, rate and yield against the cost of a kg of product. Compare a bulk chemical with a high-value product.
Black-box Balance Elemental and electron balances. Choose which rates are measured, calculate the rest, and check whether carbon and electrons close.
Network, MFA and FBA A small network with its S matrix. Measure fluxes (MFA) or set bounds and an objective (FBA), with alternative optima and a production envelope.

Material from the CompMetEng group at Chalmers University of Technology.